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DNA diet tests: what happened when trials checked the genotype

Genotype-based diet tests promise to say whether low-fat or low-carb suits your body, and that advice built on your genes works better. Two randomised trials tested those promises, one in California and one across seven European countries. Neither found the genotype doing what the tests sell it for.

Key takeaways

  • In DIETFITS, 609 adults lost a similar amount of weight in a year on a healthy low-fat diet (5.3 kg) and a healthy low-carb diet (6.0 kg), and the three-variant 'low-fat' or 'low-carb' genotype did not predict who did better on which (P = .20)[2].
  • In Food4Me, 1,269 adults in seven European countries completed six months of online advice. Personalised advice beat generic advice, and adding genotype information did not make it work better[5].
  • FTO is a real obesity gene: in Frayling's 2007 study the 16 percent of adults with two copies of the risk allele weighed about 3 kg more[6]. Across eight weight-loss trials and 9,563 people, carriers lost the same amount of weight as non-carriers[8].
  • The market is large and loosely documented. A 2026 review found 204 diet-related test panels from 104 companies; only 56 of the companies said which genes they test[1].
  • Aimosti's report reads several diet-adjacent traits, the FTO variant and a BMI score, all as tendencies or rankings. It gives no diet advice and does not assign anyone a diet type.

The claim. A DNA test can tell you which diet suits your genes. Your FTO, APOA2, PPARG and other variants show whether you will lose more weight on low-fat or low-carb, and advice matched to your genotype works better than generic advice.

Verdict. The two trials built to test this found no benefit from the genotype. In DIETFITS, the three-variant pattern proposed for choosing between low-fat and low-carb did not predict who lost more weight on which diet, and in Food4Me, adding five genotypes to personalised advice did not improve on the same advice without them.

A DNA diet test reads a set of common variants and turns them into nutrition advice, most often about micronutrients, heart health and weight[1]. The claim that carries the weight-loss products is that a genotype predicts which diet works better for a given person. That is a testable claim, and it has been tested. The Stanford DIETFITS trial randomised 609 adults to a healthy low-fat or a healthy low-carbohydrate diet for a year and genotyped all of them for the pattern meant to pick between the two[2]. The pattern did not predict who lost more weight on which diet.

What the tests sell

The best picture of this market comes from people who went looking. A 2026 scoping review searched the web as a consumer would, between 2023 and 2025, and found 104 companies selling 204 genetic testing panels with nutrition advice attached[1]. The mean price was US$234. Only 56 of the companies disclosed which genes they tested, and across those 56 the reviewers counted 3,309 different genes said to be used for diet advice. Weight loss was one of the three most common advice categories, after micronutrients and cardiovascular health.

The five genes reported most often across the panels were FTO, HLA-DQ, MTHFR, PPARG and TCF7L2[1]. An earlier study looked at what 38 company websites accessible from Finland told buyers before they paid. Eight of the 38 websites had a clearly identifiable section explaining genetics, two offered any consultation before the test, and the authors concluded that the sites did not support a well-informed decision to buy[3].

Table 1. The five genes most often reported in diet-test panels, plus APOA2, and what this article found
GeneWhat the tests use it forWhat the evidence below shows
FTOWeight management, macronutrient metabolismLinked to being heavier on average, not to losing less weight in trials
HLA-DQNutrient sensitivitiesBetter supported than the rest, for coeliac disease specifically
MTHFRMicronutrients, inflammation, blood pressureNot tested by the weight trials; covered in our piece on the MTHFR myth
PPARGMacronutrients, micronutrients, weight, diabetesOne of the three variants in the DIETFITS genotype pattern, which did not predict diet response
TCF7L2Macronutrient metabolism, weight managementNot tested by the trials covered here
APOA2Saturated fatA replicated association in observational studies, and one subgroup analysis of a trial

Source: Uses as mapped by McCartney et al.[1]; evidence from the studies cited in the sections that follow. APOA2 is not among the review's top five; it is added because its gene-diet interaction has been replicated.

Two of these deserve their own pages, and have them. The common MTHFR variants are widespread and we refuse to report them as a clinical finding. HLA-DQ is the exception, and the review itself calls its research base for coeliac disease more substantial than the rest[1]; our coeliac genes guide covers what a DNA file can and cannot rule out. The rest of this piece is about weight, because that is where the claim was tested head on.

DIETFITS: a trial built around the genotype

DIETFITS was designed to answer a question diet trials kept raising. In earlier trials comparing two diets, the average difference in weight lost was small, while people on the same diet ranged from losing about 25 kg to gaining about 5 kg[4]. The trial's stated goal was to find out which diet works for which person, and its lead hypothesis was genetic. Three variants, in FABP2 (rs1799883), PPARG (rs1801282) and ADRB2 (rs1042714), were combined into a multi-locus pattern that sorted people into a low-fat genotype, a low-carbohydrate genotype or neither. The preliminary data the design paper cites for that pattern is a 2012 patent application on genetic markers for weight management[4].

Between 2013 and 2015 the trial enrolled 609 adults aged 18 to 50 with a body mass index of 28 to 40 and no diabetes[2]. Of them, 244 (40 percent) had the low-fat genotype and 180 (30 percent) the low-carbohydrate genotype. Both groups attended 22 small-group sessions over the year, aimed at the lowest fat or carbohydrate intake each person could keep up. The diets did separate: at 12 months carbohydrates made up 48 percent of energy in the low-fat group and 30 percent in the low-carb group, and fat 29 and 45 percent. 481 people, 79 percent, completed the trial.

−5.3 kg

mean 12-month weight change on the healthy low-fat diet[2]

−6.0 kg

mean 12-month weight change on the healthy low-carbohydrate diet[2]

P = .20

for any interaction between the diet and the genotype pattern[2]

The difference between the diets, 0.7 kg, had a 95 percent confidence interval from −0.2 to 1.6 kg, so the trial could not tell the two apart. The genotype result is the one that matters here. If the pattern did what it was designed to do, people with the low-fat genotype would have lost more on the low-fat diet and people with the low-carb genotype more on the low-carb one. The authors found no significant diet-genotype interaction, and concluded that neither of the two factors they tested, the genotype pattern or insulin secretion, helped identify which diet was better for whom[2].

Food4Me: advice with and without the genotype

DIETFITS asked whether a genotype picks the right diet. Food4Me asked a different question: does genetic information make dietary advice work better? Adults in seven European countries took part online and were randomised to one of four arms[5]. The control arm got conventional, population-wide dietary advice. The other three got personalised advice built from their own baseline diet; from their diet plus phenotype, meaning body measurements and blood markers; or from diet plus phenotype plus genotype for five variants chosen as diet-responsive.

Figure 1. The four arms of Food4Me, each adding one layer of information. Personalised advice beat conventional advice at six months; the layers beyond the person's own diet, the genotype included, added nothing measurable[5].

Of the people enrolled, 1,269 completed the six months. Compared with the control arm, those given personalised advice ate less red meat, less salt and less saturated fat, took in more folate and scored higher on the Healthy Eating Index. Salt intake, for instance, was 0.65 g a day lower than in the control arm[5]. The authors then compared the personalised arms with one another and found no evidence that adding phenotypic information, or phenotypic plus genotypic information, made the advice more effective.

That result cuts against the marketing. A buyer of a DNA diet plan may well eat better afterwards, since personalisation helped. The trial separated the ingredients, and the improvement came from advice built around what the person already ate; the genotype did not add to it.

FTO: real, small, and no guide to which diet

FTO is one of the five genes diet tests report most often[1], and its link to weight is not an invention. In 2007 a genome-wide study found a common variant in FTO, rs9939609, associated with body mass index, and replicated it in 13 cohorts with 38,759 participants. The 16 percent of adults with two copies of the risk allele weighed about 3 kg more, and had 1.67 times the odds of obesity, compared with people with no copy[6]. The allele is about as common in Finland. In gnomAD's genomes, 39.9 percent of Finnish chromosomes carry it, and 821 of 5,272 Finnish genomes have two copies, about one person in six (our arithmetic on gnomAD's counts)[7].

The question a diet test needs answered is different: do carriers respond differently to a diet? A 2016 meta-analysis pooled individual data from eight randomised weight-loss trials, 9,563 people in all, with diet, exercise or drug interventions[8]. Carriers of the FTO allele were heavier when the trials began, by 0.89 kg per copy. Once the interventions started, they lost the same amount as everyone else: the extra change per copy was −0.04 kg, with a confidence interval from −0.34 to 0.26 kg. The result held across intervention type, length, ethnicity, sex, age and starting BMI.

Figure 2. FTO marks a difference in average weight, and makes no measurable difference to weight lost. The diets themselves were also hard to tell apart. Points are estimates and lines their 95 percent confidence intervals[8, 2].

Even as a predictor of weight, one variant carries little. FTO had the strongest effect of the 97 variants in a common BMI score, 0.58 kg/m² per allele, and in 33,511 patients of the Mass General Brigham Biobank the whole 97-variant score accounted for 2.9 percent of the variation in BMI[9]. The remaining 97 percent lies outside the score.

APOA2 and saturated fat

Gene-diet interactions are not imaginary, and the one in APOA2 has been reported in American, Mediterranean and Asian populations[10]. People with two copies of the C allele of rs5082 (written −265T>C) tend to have a higher BMI, but in the studies that found it, only when they eat a lot of saturated fat. Among 907 older Mediterranean adults at high cardiovascular risk, the CC genotype went with a 6.8 percent higher BMI among those with a high saturated-fat intake and no significant difference among those with a low one; the same pattern appeared in Chinese and Asian Indian participants in Singapore[10]. The CC genotype was carried by 1 to 15 percent of people, depending on the population.

Those were observational studies, which can show an association but not that changing the diet changes the outcome. The closest thing to a trial test came in 2025, from a secondary analysis of DIETFITS. Researchers kept the participants whose saturated-fat intake met a set criterion at all three time points, 22 g a day or more on the low-carb diet and less on the low-fat one, which left 309 people by our count of the paper's table[11]. In that subgroup, TT carriers lost more on the low-carb diet at 3, 6 and 12 months, while C carriers did so only at 3 months, and the genotype-by-saturated-fat interaction appeared only at 12 months. Among the 264 participants who did not consistently meet the criterion, genotype made no significant difference.

That is a lead worth a trial of its own. It is a post-randomisation subgroup of one trial, chosen by how people ate after they were assigned, with an effect that faded by 6 months in one genotype group. It does not reverse the trial's main genotype result, and it is a long way from a consumer report that sorts people by APOA2 genotype.

Knowing a genotype changes little about eating

A last defence of the tests is motivational: even if the genotype does not pick the diet, seeing one's own DNA might make people stick to it. A review using Cochrane methods pooled 18 randomised and quasi-randomised studies to test that for several behaviours[12]. For diet, seven studies with 1,784 people, the effect of receiving a DNA-based risk estimate was a standardised mean difference of 0.12, with a confidence interval from −0.00 to 0.24. The authors concluded that the evidence does not support the expectation that DNA-based risk estimates change behaviour.

There are smaller positive results. In a trial of 138 adults aged 20 to 35, those told they carried a risk version of the ACE gene and advised to limit sodium cut their intake by about 287 mg a day over a year, while the control group's rose by about 130 mg[13]. The trial also targeted caffeine, vitamin C and added sugars, and its abstract reports a significant 12-month change only for sodium in that group. One nutrient in one subgroup of a small trial is the size of the evidence on that side.

What Aimosti's report reads, file by file

We read some of the same genes the diet tests read, and we label them differently. The report has eight traits filed under metabolism and diet, an FTO card in the Frontier section, which holds exploratory associations, and a 97-variant BMI score among the emerging research scores. None of them comes with a diet, a macronutrient split or a food list. What each file type can support differs, because a chip reads a fixed list of positions, a plain VCF says nothing about positions without a variant, and a gVCF records where the reads matched.

Table 2. Diet-adjacent results in an Aimosti report, by the file uploaded
ResultChip exportPlain VCFgVCFBAM or CRAM (Deep Read)
Eight metabolism and diet traitsRead where the array typed the marker; a marker it never typed is reported as not readRead; a missing marker is taken as the reference genotype and labelled an inferenceRead; a reference block can show the marker was examinedNot read
FTO rs9939609, Frontier cardRead where typedRead; a missing marker is labelled an inferenceReadNot read
97-variant BMI scoreShown unless the array misses most of its variantsShown as a band onlyShownNot read
Low-fat or low-carb type, diet planNoNoNoNo

Source: What the report code and content do as of 10 October 2026; the BMI score is the one whose variance figure is cited above[9].

The trait cards are written as tendencies: the lactase card says symptoms, not genotype, are what matter clinically, and the caffeine card, for a slower metaboliser, calls the result a modest tendency in which habit and dose matter more. The FTO card describes the effect as small, and the BMI section says a measurement of the trait says more than its score. Deep Read, from a BAM or CRAM, is a pharmacogenomic panel; it reports CYP1A2 and ALDH2 genotypes for transparency, with no guidance attached.

For background on the two single-gene diet questions with a clear mechanism, see lactase persistence and the coeliac genes guide. For how a polygenic score is built and why it ranks rather than predicts, see polygenic scores in plain words.

What Aimosti would (and wouldn't) show you

The report has no diet section and gives no diet advice. From a chip export, a plain VCF or a gVCF it reads eight traits filed under metabolism and diet, the FTO variant rs9939609 as an exploratory Frontier card, and a 97-variant BMI score among the emerging research scores, each labelled as a tendency or a ranking. On a plain VCF a missing marker is read as the reference genotype and labelled as inferred, and the BMI score is shown as a band only. Deep Read, from a BAM or CRAM, is a pharmacogenomic panel: it reports CYP1A2 and ALDH2 genotypes with no guidance attached and does not run the trait, Frontier or score sections.

What we won't claim

We won't tell anyone what to eat, sort anyone into a low-fat or low-carb type, or present a genotype as the reason someone did or did not lose weight. The FTO card and the BMI score describe averages across large groups; they do not measure appetite or weight in the person reading them.

Bottom line. The two trials built to test this found no benefit from the genotype. In DIETFITS, the three-variant pattern proposed for choosing between low-fat and low-carb did not predict who lost more weight on which diet, and in Food4Me, adding five genotypes to personalised advice did not improve on the same advice without them.

Questions people ask

Can a DNA test tell whether low-fat or low-carb will work better for me?

No trial has shown that one can. DIETFITS tested a three-variant pattern designed for that purpose in 609 adults over a year and found no significant interaction between the pattern and the diet (P = .20)[2]. Average weight loss on the two diets was 5.3 and 6.0 kg.

Is FTO the fat gene?

Its variant rs9939609 had the strongest effect of the 97 variants in a common BMI score[9], and adults with two copies of the risk allele weigh about 3 kg more on average[6]. In eight weight-loss trials with 9,563 people, carriers lost the same amount of weight as non-carriers[8].

If personalised advice worked in Food4Me, does that not support DNA diets?

It supports personalised advice. Food4Me compared advice built from a person's diet, with and without body measurements, blood markers and five genotypes, and found that the layers beyond the diet itself added no measurable benefit[5].

Are DNA diet tests regulated?

The 2026 review of 104 companies describes the market as unregulated and highly variable; only 56 of the companies said which genes their advice used[1]. A study of 38 company websites accessible from Finland found that only two offered any consultation before the test[3].

Does Aimosti give diet advice from a 23andMe or AncestryDNA file?

No. From a chip export the report reads eight metabolism and diet traits, the FTO variant as an exploratory card and a BMI score where the array covers it, each as a tendency or a ranking. It does not assign a diet type or recommend foods.

References

  1. McCartney C, Day K, Adamski M, Bauer J, Dordevic AL. A scoping review of direct-to-consumer nutrigenetic testing: mapping genes and associated nutrition recommendations. Advances in Nutrition, 2026. doi:10.1016/j.advnut.2026.100687
  2. Gardner CD, Trepanowski JF, Del Gobbo LC, et al. Effect of low-fat vs low-carbohydrate diet on 12-month weight loss in overweight adults and the association with genotype pattern or insulin secretion: the DIETFITS randomized clinical trial. JAMA, 2018. doi:10.1001/jama.2018.0245
  3. De S, Pietilä AM, Iso-Touru T, et al. Information provided to consumers about direct-to-consumer nutrigenetic testing. Public Health Genomics, 2019. doi:10.1159/000503977
  4. Stanton MV, Robinson JL, Kirkpatrick SM, et al. DIETFITS study (diet intervention examining the factors interacting with treatment success): study design and methods. Contemporary Clinical Trials, 2017. doi:10.1016/j.cct.2016.12.021
  5. Celis-Morales C, Livingstone KM, Marsaux CF, et al. Effect of personalized nutrition on health-related behaviour change: evidence from the Food4Me European randomized controlled trial. International Journal of Epidemiology, 2017. doi:10.1093/ije/dyw186
  6. Frayling TM, Timpson NJ, Weedon MN, et al. A common variant in the FTO gene is associated with body mass index and predisposes to childhood and adult obesity. Science, 2007. doi:10.1126/science.1141634
  7. gnomAD v4 variant 16-53786615-T-A (rs9939609). Genome Aggregation Database (gnomAD), 2026. Genomes, read through the gnomAD API on 10 October 2026. Finnish: A allele 4,209 of 10,544 chromosomes, 821 homozygotes. Non-Finnish European: 27,725 of 67,962, 5,667 homozygotes.
  8. Livingstone KM, Celis-Morales C, Papandonatos GD, et al. FTO genotype and weight loss: systematic review and meta-analysis of 9563 individual participant data from eight randomised controlled trials. BMJ, 2016. doi:10.1136/bmj.i4707
  9. Dashti HS, Miranda N, Cade BE, et al. Interaction of obesity polygenic score with lifestyle risk factors in an electronic health record biobank. BMC Medicine, 2022. doi:10.1186/s12916-021-02198-9
  10. Corella D, Tai ES, Sorlí JV, et al. Association between the APOA2 promoter polymorphism and body weight in Mediterranean and Asian populations: replication of a gene-saturated fat interaction. International Journal of Obesity, 2011. doi:10.1038/ijo.2010.187
  11. Lai CQ, Parnell LD, Das SK, Gardner CD, Ordovás JM. Differential weight-loss responses of APOA2 genotype carriers to low-carbohydrate and low-fat diets: the DIETFITS trial. Obesity, 2025. doi:10.1002/oby.24288
  12. Hollands GJ, French DP, Griffin SJ, et al. The impact of communicating genetic risks of disease on risk-reducing health behaviour: systematic review with meta-analysis. BMJ, 2016. doi:10.1136/bmj.i1102
  13. Nielsen DE, El-Sohemy A. Disclosure of genetic information and change in dietary intake: a randomized controlled trial. PLoS ONE, 2014. doi:10.1371/journal.pone.0112665

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